SNPforID browser

SNP

internal
SNP code

AFRICA
(N=385)

SNPforID 34-plex
summaries

rs2304925

P01

T: 0.475
G: 0.525

rs5997008

P02

C: 0.542
A: 0.458

rs1321333

P03

T: 0.044
C: 0.956

rs2814778

P04

T: 0.100
C: 0.900

rs917118

A07

G: 0.319
A: 0.681

rs1024116

A29

G: 0.708
A: 0.292

rs7897550

P05

C: 0.910
T: 0.090

rs10843344

P06a

C: 0.966
T: 0.034

rs722098

A21

A: 0.224
G: 0.776

rs239031

P07

C: 0.612
T: 0.388

rs12913832

P08

A: 0.991
G: 0.009

rs2040411

A40

G: 0.218
A: 0.782

rs1978806

P09a

T: 0.586
C: 0.414

rs773658

P10

G: 0.565
C: 0.435

rs10141763

P11

A: 0.617
T: 0.383

rs182549

P12

C: 0.957
T: 0.043

rs1573020

P13

G: 0.441
A: 0.559

rs896788

P14

C: 0.615
T: 0.385

rs2065160

P15

A: 0.518
G: 0.482

rs2572307

P16a

A: 0.431
G: 0.569

rs2303798

P17

T: 0.567
C: 0.433

rs2065982

P18

A: 0.904
G: 0.096

rs3785181

P19

C: 0.919
T: 0.081

rs881929

P20

G: 0.902
T: 0.098

rs1498444

P21

A: 0.859
C: 0.141

rs1426654

P22a

T: 0.088
C: 0.912

rs2026721

P23

A: 0.525
G: 0.475

rs4540055

P24

A: 0.134
C: 0.513
T: 0.353

rs1335873

A52

T: 0.847
A: 0.153

rs16891982

P25a

G: 0.944
C: 0.056

rs730570

P26

C: 0.754
T: 0.246

rs1886510

A13

G: 0.764
A: 0.236

rs5030240

P27

C: 0.369
G: 0.316
A: 0.316

rs3827760

P28

A: 0.990
G: 0.010

AFRICA
(N=385)

7 populations/groups were queried, and 34 SNPs are displayed

SNP	internal	chr	pos	val	gene	ref	anc	var	population	N	MA	MAF	H_OBS	H_EXP	F_S	F_ST	I_n
rs2304925	P01	17	75551667		-	T	T	TG	AFRICA	385	T	0.475	0.509	0.499	-	0.029	0.024
rs5997008	P02	22	26350103		MYO18B	C	A	CA	AFRICA	384	A	0.458	0.469	0.497	-	0.040	0.036
rs1321333	P03	20	38849642		-	A	A	TC	AFRICA	384	T	0.044	0.078	0.085	-	0.053	0.028
rs2814778	P04	01	159174683		DARC	A	A	TC	AFRICA	385	T	0.100	0.153	0.180	-	0.199	0.288
rs917118	A07	07	4457003		-	C	T	GA	AFRICA	384	G	0.319	0.456	0.434	-	0.044	0.028
rs1024116	A29	18	75432386		-	G	G	GA	AFRICA	384	A	0.292	0.365	0.413	-	0.037	0.018
rs7897550	P05	10	17064992		CUBN	G	G	CT	AFRICA	385	T	0.090	0.169	0.163	-	0.036	0.040
rs10843344	P06a	12	29369871		-	C	C	CT	AFRICA	383	T	0.034	0.063	0.066	-	0.030	0.022
rs722098	A21	21	16685598		-	A	G	AG	AFRICA	384	A	0.224	0.323	0.348	-	0.049	0.083
rs239031	P07	21	17710424		-	C	C	CT	AFRICA	383	T	0.388	0.446	0.475	-	0.036	0.019
rs12913832	P08	15	28365618		HERC2	A	A	AG	AFRICA	225	G	0.009	0.018	0.018	-	0.025	0.008
rs2040411	A40	22	47836412		-	G	A	GA	AFRICA	385	G	0.218	0.348	0.341	-	0.054	0.035
rs1978806	P09a	10	34755348		PARD3	A	A	TC	AFRICA	380	C	0.414	0.445	0.485	-	0.038	0.037
rs773658	P10	12	56603834		RNF41	C	G	GC	AFRICA	384	C	0.435	0.464	0.492	-	0.112	0.093
rs10141763	P11	14	36170607		RALGAPA1	T	T	AT	AFRICA	385	T	0.383	0.475	0.473	-	0.057	0.054
rs182549	P12	02	136616754		MCM6	C	C	CT	AFRICA	380	T	0.043	0.087	0.083	-	0.038	0.018
rs1573020	P13	01	36768200		-	G	A	GA	AFRICA	383	G	0.441	0.433	0.493	-	0.096	0.070
rs896788	P14	02	7149155		RNF144A	G	G	CT	AFRICA	384	T	0.385	0.453	0.474	-	0.039	0.028
rs2065160	P15	01	204790977		-	T	C	AG	AFRICA	384	G	0.482	0.552	0.499	-	0.045	0.043
rs2572307	P16a	21	25672460		-	T	C	AG	AFRICA	383	A	0.431	0.449	0.490	-	0.046	0.035
rs2303798	P17	19	42410331		ARHGEF1	G	G	TC	AFRICA	383	C	0.433	0.413	0.491	-	0.069	0.042
rs2065982	P18	13	34864240		-	T	T	AG	AFRICA	382	G	0.096	0.186	0.173	-	0.012	0.013
rs3785181	P19	16	90105333		GAS8	G	G	CT	AFRICA	383	T	0.081	0.141	0.149	-	0.021	0.016
rs881929	P20	16	31079371		ZNF668	G	G	GT	AFRICA	384	T	0.098	0.169	0.176	-	0.019	0.029
rs1498444	P21	03	168645035		-	A	A	AC	AFRICA	384	C	0.141	0.224	0.242	-	0.060	0.051
rs1426654	P22a	15	48426484		SLC24A5	A	G	TC	AFRICA	385	T	0.088	0.156	0.161	-	0.062	0.056
rs2026721	P23	04	159181963		-	A	G	AG	AFRICA	384	G	0.475	0.492	0.499	-	0.055	0.032
rs4540055	P24	04	38803255		TLR1	T	A	ACT	AFRICA	384	A	0.134	0.594	0.594	-	0.036	0.069
rs1335873	A52	13	20901724		-	A	A	TA	AFRICA	385	A	0.153	0.249	0.260	-	0.100	0.051
rs16891982	P25a	05	33951693		SLC45A2	C	C	GC	AFRICA	385	C	0.056	0.101	0.105	-	0.077	0.030
rs730570	P26	14	101142890		-	G	G	CT	AFRICA	384	T	0.246	0.315	0.371	-	0.083	0.057
rs1886510	A13	13	22374700		-	C	T	GA	AFRICA	384	A	0.236	0.326	0.360	-	0.138	0.107
rs5030240	P27	11	32424389		WT1	G	-	CGA	AFRICA	385	A	0.316	0.621	0.665	-	0.020	0.038
rs3827760	P28	02	109513601		EDAR	T	T	AG	AFRICA	105	G	0.010	0.000	0.019	-	0.117	0.036

	AFRICA (N=385)

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