SNP internal
SNP code
AFRICA
(N=512)
SNPforID 52-plex
summaries
rs1490413 A01
C: 0.546
T: 0.454
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs876724 A02
C: 0.857
T: 0.143
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1357617 A03
A: 0.196
T: 0.804
AT
AT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2046361 A04
T: 0.470
A: 0.530
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs717302 A05
G: 0.522
A: 0.478
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1029047 A06
T: 0.378
A: 0.622
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs917118 A07
G: 0.331
A: 0.669
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs763869 A08
C: 0.486
T: 0.514
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1015250 A09
C: 0.300
G: 0.700
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs735155 A10
C: 0.688
T: 0.312
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs901398 A11
C: 0.418
T: 0.582
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2107612 A12
G: 0.406
A: 0.594
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1886510 A13
G: 0.899
A: 0.097
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1454361 A14
A: 0.690
T: 0.310
AT
AT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2016276 A15
T: 0.918
C: 0.082
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs729172 A16
G: 0.804
T: 0.196
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs740910 A17
A: 0.983
G: 0.017
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1493232 A18
G: 0.431
T: 0.569
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs719366 A19
C: 0.149
T: 0.851
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1031825 A20
T: 0.442
G: 0.558
TG
TG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs722098 A21
A: 0.213
G: 0.787
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs733164 A22
G: 0.667
A: 0.333
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs826472 A23
A: 0.198
G: 0.802
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2831700 A24
T: 0.637
C: 0.363
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs873196 A25
G: 0.275
A: 0.725
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1382387 A26
G: 0.582
T: 0.418
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2111980 A27
A: 0.689
G: 0.311
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2056277 A28
G: 0.865
A: 0.135
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1024116 A29
G: 0.715
A: 0.285
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs727811 A30
C: 0.752
A: 0.248
CA
CA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1413212 A32
T: 0.319
C: 0.681
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs938283 A33
T: 0.880
C: 0.120
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1979255 A34
C: 0.373
G: 0.627
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1463729 A35
G: 0.351
A: 0.649
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2076848 A36
T: 0.794
A: 0.206
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1355366 A37
T: 0.424
C: 0.576
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs907100 A38
C: 0.195
G: 0.805
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs354439 A39
T: 0.311
A: 0.689
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2040411 A40
G: 0.221
A: 0.779
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs737681 A41
T: 0.418
C: 0.582
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2830795 A42
A: 0.839
G: 0.161
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs251934 A43
A: 0.782
G: 0.218
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs914165 A44
C: 0.207
T: 0.793
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs10495407 A45
C: 0.921
T: 0.079
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1360288 A46
G: 0.757
A: 0.243
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs964681 A48
T: 0.777
C: 0.223
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1005533 A49
G: 0.462
A: 0.538
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs8037429 A50
G: 0.533
A: 0.467
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs891700 A51
A: 0.465
G: 0.535
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1335873 A52
T: 0.876
A: 0.124
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1028528 A53
A: 0.270
G: 0.730
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1528460 A54
G: 0.871
A: 0.129
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
 
AFRICA
(N=512)
7 populations/groups were queried, and 52 SNPs are displayed
SNPinternalchrposvalgenerefancvarpopulationNMAMAFHOBSHEXPFSFSTIn
rs1490413A01014367323yes-GGCT
AFRICA
508T0.4540.4900.496-0.0190.014
rs876724A0202114974yes-CCCT
AFRICA
506T0.1430.2230.246-0.0360.042
rs1357617A0303961782yes-TAAT
AFRICA
482A0.1960.2880.315-0.0310.041
rs2046361A040410969059yes-AATA
AFRICA
432T0.4700.4770.498-0.0320.023
rs717302A05052879395yes-GGGA
AFRICA
509A0.4780.4660.499-0.0360.092
rs1029047A06061135939yes-TTTA
AFRICA
503T0.3780.4370.470-0.0180.029
rs917118A07074457003yes-CTGA
AFRICA
475G0.3310.4380.443-0.0390.024
rs763869A08081375610yes-CTCT
AFRICA
509C0.4860.4930.500-0.0350.036
rs1015250A09091823774yes-GCCG
AFRICA
510C0.3000.3650.420-0.0660.044
rs735155A10103374178yes-GGCT
AFRICA
504T0.3120.4090.429-0.0270.043
rs901398A111111096221yes-CTCT
AFRICA
507C0.4180.4460.487-0.0190.019
rs2107612A1212888320yesWNK1GAGA
AFRICA
499G0.4060.4390.482-0.0580.036
rs1886510A131322374700yes-CTGA
AFRICA
455T0.0040.1670.183-0.0560.099
rs1454361A141425850832yes-AAAT
AFRICA
502T0.3100.4040.428-0.0250.039
rs2016276A151524571796yes-A-TC
AFRICA
511C0.0820.1570.151-0.0320.024
rs729172A16165606197yes-CCGT
AFRICA
496T0.1960.3020.315-0.0330.016
rs740910A17175706623yes-AAAG
AFRICA
504G0.0170.0300.033-0.0150.011
rs1493232A18181127986yes-CCGT
AFRICA
491G0.4310.5110.490-0.0330.016
rs719366A191928463337yes-CTCT
AFRICA
504C0.1490.2620.253-0.0180.023
rs1031825A20204447483yes-ACTG
AFRICA
478T0.4420.4000.493-0.0760.084
rs722098A212116685598yes-AGAG
AFRICA
507A0.2130.3160.335-0.0490.071
rs733164A222227816784yes-GGGA
AFRICA
501A0.3330.4390.444-0.0540.055
rs826472A23102406631yes-TCAG
AFRICA
475A0.1980.2690.317-0.0320.032
rs2831700A242129679687yes-AATC
AFRICA
507C0.3630.4300.462-0.0850.042
rs873196A251498845531yes-CCGA
AFRICA
509G0.2750.3580.399-0.0230.026
rs1382387A261680106361yes-GGGT
AFRICA
499T0.4180.4270.486-0.0910.073
rs2111980A2712106328254yes-AAAG
AFRICA
466G0.3110.4210.429-0.0190.013
rs2056277A2808139399116yesFAM135BCCGA
AFRICA
505A0.1350.2180.233-0.0410.027
rs1024116A291875432386yes-GGGA
AFRICA
507A0.2850.3570.408-0.0280.019
rs727811A3006165045334yes-CCCA
AFRICA
506A0.2480.3540.373-0.0210.016
rs1413212A3201242806797yes-AGTC
AFRICA
506T0.3190.4250.435-0.0320.033
rs938283A331777468498yesRBFOX3TCTC
AFRICA
508C0.1200.1930.211-0.0210.014
rs1979255A3404190318080yes-GGCG
AFRICA
505C0.3730.4650.468-0.0300.034
rs1463729A3509126881448yes-GAGA
AFRICA
510G0.3510.4270.456-0.0820.042
rs2076848A3611134667546yes-TTTA
AFRICA
502A0.2060.3210.327-0.0760.056
rs1355366A3703190806108yes-AGTC
AFRICA
509T0.4240.4910.489-0.0210.029
rs907100A3802239563579yes-GCCG
AFRICA
503C0.1950.2740.314-0.0320.037
rs354439A3913106938411yes-TATA
AFRICA
501T0.3110.3950.429-0.0210.021
rs2040411A402247836412yes-GAGA
AFRICA
506G0.2210.3040.345-0.0770.036
rs737681A4107155990813yes-TTTC
AFRICA
507T0.4180.4890.487-0.0280.057
rs2830795A422128608163yes-AAAG
AFRICA
505G0.1610.2440.271-0.0500.019
rs251934A4305174778678yes-TCAG
AFRICA
507G0.2180.3450.341-0.0290.044
rs914165A442142415929yes-GGCT
AFRICA
503C0.2070.3140.328-0.0350.039
rs10495407A4501238439308yes-GGCT
AFRICA
502T0.0790.1450.145-0.0540.036
rs1360288A4609128968063yes-CCGA
AFRICA
506A0.2430.3280.368-0.0230.015
rs964681A4810132698419yes-TCTC
AFRICA
508C0.2230.3250.347-0.0140.020
rs1005533A492039487110yes-GAGA
AFRICA
507G0.4620.5010.497-0.0410.032
rs8037429A501553616909yes-CCGA
AFRICA
506A0.4670.5120.498-0.0180.019
rs891700A5101239881926yesCHRM3AGAG
AFRICA
509A0.4650.4850.497-0.0430.033
rs1335873A521320901724yes-AATA
AFRICA
505A0.1240.1800.217-0.1490.040
rs1028528A532248362290yes-AGAG
AFRICA
509A0.2700.3630.394-0.0810.059
rs1528460A541555210705yes-CCGA
AFRICA
501A0.1290.1980.224-0.0780.053
AFRICA
(N=512)