SNP internal
SNP code
CENTRAL-SOUTH ASIA
(N=234)
SNPforID 52-plex
summaries
rs1490413 A01
C: 0.482
T: 0.518
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs876724 A02
C: 0.724
T: 0.276
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1357617 A03
A: 0.293
T: 0.707
AT
AT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2046361 A04
T: 0.568
A: 0.432
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs717302 A05
G: 0.375
A: 0.625
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1029047 A06
T: 0.630
A: 0.370
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs917118 A07
G: 0.552
A: 0.448
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs763869 A08
C: 0.287
T: 0.713
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1015250 A09
C: 0.716
G: 0.284
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs735155 A10
C: 0.393
T: 0.607
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs901398 A11
C: 0.274
T: 0.726
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2107612 A12
G: 0.272
A: 0.728
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1886510 A13
G: 0.700
A: 0.209
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1454361 A14
A: 0.476
T: 0.524
AT
AT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2016276 A15
T: 0.786
C: 0.214
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs729172 A16
G: 0.726
T: 0.274
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs740910 A17
A: 0.738
G: 0.262
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1493232 A18
G: 0.242
T: 0.758
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs719366 A19
C: 0.377
T: 0.623
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1031825 A20
T: 0.423
G: 0.577
TG
TG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs722098 A21
A: 0.680
G: 0.320
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs733164 A22
G: 0.748
A: 0.252
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs826472 A23
A: 0.312
G: 0.688
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2831700 A24
T: 0.665
C: 0.335
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs873196 A25
G: 0.297
A: 0.703
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1382387 A26
G: 0.293
T: 0.707
GT
GT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2111980 A27
A: 0.491
G: 0.509
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2056277 A28
G: 0.833
A: 0.167
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1024116 A29
G: 0.588
A: 0.412
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs727811 A30
C: 0.487
A: 0.513
CA
CA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1413212 A32
T: 0.344
C: 0.656
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs938283 A33
T: 0.897
C: 0.103
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1979255 A34
C: 0.435
G: 0.565
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1463729 A35
G: 0.493
A: 0.507
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2076848 A36
T: 0.554
A: 0.446
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1355366 A37
T: 0.527
C: 0.473
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs907100 A38
C: 0.550
G: 0.450
CG
CG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs354439 A39
T: 0.362
A: 0.638
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2040411 A40
G: 0.539
A: 0.461
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs737681 A41
T: 0.349
C: 0.651
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs2830795 A42
A: 0.770
G: 0.230
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs251934 A43
A: 0.758
G: 0.242
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs914165 A44
C: 0.571
T: 0.429
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs10495407 A45
C: 0.740
T: 0.260
CT
CT europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1360288 A46
G: 0.627
A: 0.373
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs964681 A48
T: 0.577
C: 0.423
TC
TC europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1005533 A49
G: 0.601
A: 0.399
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs8037429 A50
G: 0.457
A: 0.543
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs891700 A51
A: 0.417
G: 0.583
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1335873 A52
T: 0.272
A: 0.728
TA
TA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1028528 A53
A: 0.709
G: 0.291
AG
AG europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
rs1528460 A54
G: 0.397
A: 0.603
GA
GA europeamericacentral_south_asiaeast_asiamiddle_eastoceaniaafrica
 
CENTRAL-SOUTH ASIA
(N=234)
7 populations/groups were queried, and 52 SNPs are displayed
SNPinternalchrposvalgenerefancvarpopulationNMAMAFHOBSHEXPFSFSTIn
rs1490413A01014367323yes-GGCT
CENTRAL-SOUTH ASIA
223C0.4820.4620.499-0.0280.014
rs876724A0202114974yes-CCCT
CENTRAL-SOUTH ASIA
223T0.2760.3810.399-0.0300.015
rs1357617A0303961782yes-TAAT
CENTRAL-SOUTH ASIA
234A0.2930.4570.414-0.0290.015
rs2046361A040410969059yes-AATA
CENTRAL-SOUTH ASIA
229A0.4320.5150.491-0.0330.016
rs717302A05052879395yes-GGGA
CENTRAL-SOUTH ASIA
232G0.3750.4740.469-0.0190.009
rs1029047A06061135939yes-TTTA
CENTRAL-SOUTH ASIA
230A0.3700.5040.466-0.0420.022
rs917118A07074457003yes-CTGA
CENTRAL-SOUTH ASIA
232A0.4480.5340.495-0.0290.015
rs763869A08081375610yes-CTCT
CENTRAL-SOUTH ASIA
232C0.2870.3490.409-0.0250.012
rs1015250A09091823774yes-GCCG
CENTRAL-SOUTH ASIA
232G0.2840.3710.407-0.0170.008
rs735155A10103374178yes-GGCT
CENTRAL-SOUTH ASIA
215C0.3930.4700.477-0.0270.015
rs901398A111111096221yes-CTCT
CENTRAL-SOUTH ASIA
234C0.2740.3850.397-0.0140.009
rs2107612A1212888320yesWNK1GAGA
CENTRAL-SOUTH ASIA
232G0.2720.3790.396-0.0130.007
rs1886510A131322374700yes-CTGA
CENTRAL-SOUTH ASIA
232T0.0910.4090.458-0.0330.048
rs1454361A141425850832yes-AAAT
CENTRAL-SOUTH ASIA
233A0.4760.4030.499-0.0460.023
rs2016276A151524571796yes-A-TC
CENTRAL-SOUTH ASIA
234C0.2140.3250.336-0.0210.012
rs729172A16165606197yes-CCGT
CENTRAL-SOUTH ASIA
234T0.2740.3760.397-0.0220.010
rs740910A17175706623yes-AAAG
CENTRAL-SOUTH ASIA
225G0.2620.3380.387-0.0280.014
rs1493232A18181127986yes-CCGT
CENTRAL-SOUTH ASIA
231G0.2420.1820.367-0.0780.057
rs719366A191928463337yes-CTCT
CENTRAL-SOUTH ASIA
228C0.3770.4560.470-0.0100.006
rs1031825A20204447483yes-ACTG
CENTRAL-SOUTH ASIA
215T0.4230.4560.488-0.0200.010
rs722098A212116685598yes-AGAG
CENTRAL-SOUTH ASIA
230G0.3200.3610.435-0.0130.006
rs733164A222227816784yes-GGGA
CENTRAL-SOUTH ASIA
226A0.2520.3630.377-0.0560.027
rs826472A23102406631yes-TCAG
CENTRAL-SOUTH ASIA
223A0.3120.3900.429-0.0280.014
rs2831700A242129679687yes-AATC
CENTRAL-SOUTH ASIA
230C0.3350.4170.445-0.0470.038
rs873196A251498845531yes-CCGA
CENTRAL-SOUTH ASIA
234G0.2970.3720.418-0.0640.039
rs1382387A261680106361yes-GGGT
CENTRAL-SOUTH ASIA
225G0.2930.3730.415-0.0470.024
rs2111980A2712106328254yes-AAAG
CENTRAL-SOUTH ASIA
227A0.4910.5070.500-0.0100.005
rs2056277A2808139399116yesFAM135BCCGA
CENTRAL-SOUTH ASIA
224A0.1670.2720.279-0.0210.011
rs1024116A291875432386yes-GGGA
CENTRAL-SOUTH ASIA
221A0.4120.4340.484-0.0500.026
rs727811A3006165045334yes-CCCA
CENTRAL-SOUTH ASIA
232C0.4870.5520.500-0.0120.007
rs1413212A3201242806797yes-AGTC
CENTRAL-SOUTH ASIA
228T0.3440.4080.452-0.0370.018
rs938283A331777468498yesRBFOX3TCTC
CENTRAL-SOUTH ASIA
223C0.1030.1700.185-0.0230.012
rs1979255A3404190318080yes-GGCG
CENTRAL-SOUTH ASIA
215C0.4350.4790.492-0.0330.017
rs1463729A3509126881448yes-GAGA
CENTRAL-SOUTH ASIA
223G0.4930.5020.500-0.0200.010
rs2076848A3611134667546yes-TTTA
CENTRAL-SOUTH ASIA
233A0.4460.4810.494-0.0230.010
rs1355366A3703190806108yes-AGTC
CENTRAL-SOUTH ASIA
223C0.4730.4980.499-0.0190.009
rs907100A3802239563579yes-GCCG
CENTRAL-SOUTH ASIA
230G0.4500.2830.495-0.0240.014
rs354439A3913106938411yes-TATA
CENTRAL-SOUTH ASIA
228T0.3620.4430.462-0.0290.017
rs2040411A402247836412yes-GAGA
CENTRAL-SOUTH ASIA
230A0.4610.4960.497-0.0160.008
rs737681A4107155990813yes-TTTC
CENTRAL-SOUTH ASIA
215T0.3490.4000.454-0.0500.027
rs2830795A422128608163yes-AAAG
CENTRAL-SOUTH ASIA
224G0.2300.3260.354-0.0230.012
rs251934A4305174778678yes-TCAG
CENTRAL-SOUTH ASIA
215G0.2420.3810.367-0.0230.011
rs914165A442142415929yes-GGCT
CENTRAL-SOUTH ASIA
231T0.4290.4940.490-0.0380.021
rs10495407A4501238439308yes-GGCT
CENTRAL-SOUTH ASIA
219T0.2600.4110.385-0.0310.016
rs1360288A4609128968063yes-CCGA
CENTRAL-SOUTH ASIA
228A0.3730.4300.468-0.0270.015
rs964681A4810132698419yes-TCTC
CENTRAL-SOUTH ASIA
215C0.4230.4470.488-0.0310.018
rs1005533A492039487110yes-GAGA
CENTRAL-SOUTH ASIA
223A0.3990.5200.480-0.0240.014
rs8037429A501553616909yes-CCGA
CENTRAL-SOUTH ASIA
222G0.4570.4370.496-0.0230.011
rs891700A5101239881926yesCHRM3AGAG
CENTRAL-SOUTH ASIA
234A0.4170.4830.486-0.0210.010
rs1335873A521320901724yes-AATA
CENTRAL-SOUTH ASIA
230T0.2720.3610.396-0.0460.024
rs1028528A532248362290yes-AGAG
CENTRAL-SOUTH ASIA
232G0.2910.4180.413-0.0140.008
rs1528460A541555210705yes-CCGA
CENTRAL-SOUTH ASIA
232G0.3970.4220.479-0.0590.030
CENTRAL-SOUTH ASIA
(N=234)